BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F10SP1|AL429261
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1660 1888 0.0
>3x_Contig1660
Length = 13166
Score = 1888 bits (950), Expect = 0.0
Identities = 974/982 (99%), Gaps = 2/982 (0%)
Strand = Plus / Minus
Query: 1 aattcatcttgtgctagtaatacccggttcgtatcctcgtgtcccatactcattataccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11273 aattcatcttgtgctagtaatacccggttcgtatcctcgtgtcccatactcattataccg 11214
Query: 61 ttggtgacacaattttgtaagttccattgtaaatctattagattgttcaaatggagcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11213 ttggtgacacaattttgtaagttccattgtaaatctattagattgttcaaatggagcgtc 11154
Query: 121 tttaacttctttaaatcgttttccatcttgatgacttcgttatggttcactttttcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11153 tttaacttctttaaatcgttttccatcttgatgacttcgttatggttcactttttcaaac 11094
Query: 181 gaactgaacacttctttgaattgttcaaacgattcaagctttgctatcacagtatctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11093 gaactgaacacttctttgaattgttcaaacgattcaagctttgctatcacagtatctctg 11034
Query: 241 tacatcgccaagatcttgccacgacgcgatttcatgtagtctactttactcgagttatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11033 tacatcgccaagatcttgccacgacgcgatttcatgtagtctactttactcgagttatta 10974
Query: 301 gtggttgtgctagtagaggctgcaggtgtgctgagaacactgtgagttgtcgctccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10973 gtggttgtgctagtagaggctgcaggtgtgctgagaacactgtgagttgtcgctccagca 10914
Query: 361 gcaccagcaccattgctgatagcactcgtgctgctgctgctgctgctgctgttgcttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10913 gcaccagcaccattgctgatagcactcgtgctgctgctgctgctgctgctgttgcttttg 10854
Query: 421 tttccattgctccctgtatgagawactttccccaccttgccccgtttcaactctttctca 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10853 tttccattgctccctgtatgagatactttccccaccttgccccgtttcaactctttctca 10794
Query: 481 ttcttggctagtttccccaccaaatcccgttggcatcgctcgtacacgtccattatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10793 ttcttggctagtttccccaccaaatcccgttggcatcgctcgtacacgtccattatcttg 10734
Query: 541 ttttgtatctcgttgatttgtaaatgataaaacgttatctgtccatcgttcaaacttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10733 ttttgtatctcgttgatttgtaaatgataaaacgttatctgtccatcgttcaaacttgtc 10674
Query: 601 tggttcgggaacatctcttttatcatatccagaatttcgttgatcttgatatcttccatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10673 tggttcgggaacatctcttttatcatatccagaatttcgttgatcttgatatcttccatg 10614
Query: 661 cgagtgaacttgtgtatcttatgatcgttgaacccagttcgtaatctaatcaacgatact 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10613 cgagtaaacttgtgtatcttatgatcgttgaacccagttcgtaatctaatcaacgatact 10554
Query: 721 ttattcgtttgtgaatwcaataactcatcgtataatacatccagcagcmaaaactctttg 780
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10553 ttattcgtttgtgaattcaataactcatcgtataatacatccagcagcaaaaactctttg 10494
Query: 781 aacatggtttagtggtggcaatctttccagtgtctgatgttggtaagttttggtttcgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10493 aacatggtttagtggtggcaatctttccagtgtctgatgttggtaagttttggtttcgtc 10434
Query: 841 agtctctcttttcagctcttacctttccctttcacttcttctagtctcatctcgccttgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10433 agtctctcttttcagctcttacctttccctttcacttcttctagtctcatctcgccttgt 10374
Query: 901 ttcctttcaattatcaatatcatcatcgtcatctataatttta-ctatatctttaatgcg 959
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10373 ttcctttcaattatcaatatcatcatcgtcatctataattttacctatatctttaatgcg 10314
Query: 960 ttataagttg-amaaaggtaga 980
| |||||||| | |||||||||
Sbjct: 10313 taataagttgaacaaaggtaga 10292
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8804
Number of Sequences: 1807
Number of extensions: 8804
Number of successful extensions: 474
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)